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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928730.1_cds_XP_016476243.1_68092
CDS Infomation

[gene=LOC107797833] [db_xref=GeneID:107797833] [protein=E3 ubiquitin-protein ligase RGLG2-like] [protein_id=XP_016476243.1] [location=complement(join(119600..119683,119960..120016,120217..120343,120914..121041,121128..121233,122052..122131,122283..122380,122473..122586,122705..122845,123375..123459,125561..125887))] [gbkey=CDS]
Sequence

ATGGGTAATATTTTCAGTTTTCCATTTCGTAAGCAGAGTAGTAGTAGTAGTAGTAGGAAT
TCCAGTAATAACAACACTTCTACTTCTTTTTCTTCGATTTCTAAGAGCAGAAATCGGTTG
CTTTCTTCTTTCTCCCCCTTTGAATCCTCTGTAAATGATAATAATAATAGTTCTATTCCG
GTGAAATGTTCTTCTTCTGATTCGGGTTCTAGCGATGGGAAGATGGCGTCCACTAACAGC
AAAAAGGAAACGGAACAAATGACTCAGAATAAGAAGAAGAAGAGCAAGTACTACTATATT
CCTGATAATTTTTCATCCCTTGATCAGGTCACTATAGCACTGAGAGAATCGGGATTGGAG
TCGTCAAATTTAATTATTGGGATAGATTTCACGAAAAGTAATGAATGGACTGGTAAAGTT
TCTTTCAACAACAAGAGCTTGCATGCAATAGGTGATTCGCTCAATCCATATGAGAAAGCC
ATATCTATCATTGGAAAGACATTGTCTCCATTTGATGAAGACAATTTAATTCCTTGTTTC
GGGTTTGGTGATGTGACTACGCATGATCAAGATGTGTTTAGCTTTCATAGCGATCACTCT
CCTTGCCATGGCTTTGAAGAAGTCCTAGCTTGCTACAGGAAAATAGTTCCAAATCTGCAA
TTATCTGGGCCGACATCTTATGGGCCAGTAGTAGATGCTGCAGTAGATATAGTGGAGAGA
ACGGGTGGACAATACCATGTCTTGGTTATCATCGCTGATGGCCAGGTTACAAGGAGCGTC
AATACCAATGATTCAGAACTCAGCCCACAAGAAGAGAAGACAATTAGTTCTATTGTCACC
GCGAGCATGTATCCTCTCTCTATTGTTCTCGTTGGAGTTGGTGATGGACCTTGGGAAGAC
ATGCAAAAATTTGATGACCGGATTCCTGCGCGTGAATTTGATAATTTTCAGTTTGTGAAT
TTTACCGGTATCATGACAAAACATACAACTGATTCTGCAAAGGAATCTGCATTTGCTCTT
GCTGCACTTATGGAGATCCCTATCCAATATAAAGCAGCTCGAGAACTTGGTCTGCTAGGG
AAAAGAACATCTAAGGCGAAGAAAGTAGTTCCAAGACCACCACCAGTTCCTTACAAACGC
GCCATGGCAGTCCCAACTCAAGATCAAAGCAGTCTTTCAGGATCCGCGCAAAATGAACAT
AGCCAAGTTTGCCCAGTTTGTCTAACTGGTTCTAAGGACCTGGCTTTTGGTTGTGGACAC
ATGACTTGCAGAGAATGTGGTCCAAGATTGTCAGATTGTCCCATTTGTCGTCGACGGATT
ACTAGTCGCATCCGATTATACACTTGA

Peptide Sequence

PEP ID

XP_016476243.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Nicotiana tabacum]
Sequence

MGNIFSFPFRKQSSSSSSRNSSNNNTSTSFSSISKSRNRLLSSFSPFESSVNDNNNSSIP
VKCSSSDSGSSDGKMASTNSKKETEQMTQNKKKKSKYYYIPDNFSSLDQVTIALRESGLE
SSNLIIGIDFTKSNEWTGKVSFNNKSLHAIGDSLNPYEKAISIIGKTLSPFDEDNLIPCF
GFGDVTTHDQDVFSFHSDHSPCHGFEEVLACYRKIVPNLQLSGPTSYGPVVDAAVDIVER
TGGQYHVLVIIADGQVTRSVNTNDSELSPQEEKTISSIVTASMYPLSIVLVGVGDGPWED
MQKFDDRIPAREFDNFQFVNFTGIMTKHTTDSAKESAFALAALMEIPIQYKAARELGLLG
KRTSKAKKVVPRPPPVPYKRAMAVPTQDQSSLSGSAQNEHSQVCPVCLTGSKDLAFGCGH
MTCRECGPRLSDCPICRRRITSRIRLYT

Transcript Sequence

Gene sequence data has not been registered.